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- Real Life Replicants | OmniSci Magazine
< Back to Issue 4 Real Life Replicants by Elijah McEvoy 1 July 2023 Edited by Yasmin Potts and Megane Boucherat Illustrated by Jolin See Hal, Ultron and (of course) the Terminator. Comparisons between these fictional, world-destroying, artificial intelligence systems and those in our current age of AI are seemingly never-ending. As a child born with a lightsaber in hand, I find these sensationalist remarks endlessly entertaining. Not only because it baffles me to see concepts once relegated to the realm of science fiction be discussed as serious news topics, but also because they’ve got their references all mixed up. The current challenge posed by the new wave of generative artificial intelligence doesn’t come in the form of a ruthless, gun-toting Arnie. It comes in the form of replicants. Just like these uncannily human androids from Ridley Scott’s cult classic Blade Runner, the rapidly increasing capacity of AI to talk, look and create like humans is beginning to blur the line between what is authentically human and what is the product of an algorithm. From the posh C3P0 to the snarky Cortana, having a friendly AI sidekick has always been a childhood dream of mine. This dream has now become a reality with the rise in AI chat-bots. At the forefront of these is Replika, an app that enables users to talk to their own personalized AI via the use of text-like messages. For its two million users (1), Replika provides a variety of functions. For some, Replika acts as a friend in times of loneliness; a feature that contributed to its spike in users during the height of the COVID-19 pandemic (2). For others, as founder Eugenia Kuyda suggests, it provides a space for users to “open up” about personal or mental health issues and “feel accepted” by a human-like figure (1). For many though, Replika is a digital romantic partner. While it is easy to snicker at the concept of an AI girlfriend, those with past relationship trauma or those living in environments that may be hostile towards their sexuality have used Replika as an outlet to explore genuine feelings of love in a safe setting (3). However, with such attachment comes the chance for exploitation. As stated by Nir Eisikovits, Director of the Applied Ethics Centre at the University of Massachusetts, his concern is “not whether machines are sentient” but rather our own tendency “to imagine that they are” (4). Like the holographic billboards for the AI “JOI” in Blade Runner 2049, suggestive advertisements and aggressive flirting by the AI itself have all been employed by Replika to encourage users to stay on the app and pay a premium subscription for explicit content (5). While Replika has since removed sexual material, the large backlash from users at this decision (6) highlights the unethically coercive power such mimicry of human personality could have on consumers. For years, we’ve been warned of the danger of manipulative TV advertisements encouraging excessive junk food consumption and gambling. Imagine what could be done when that ad is no longer a 30 second video but instead an anthropomorphized AI tailored exactly to you, your interests and your vulnerabilities. Not only is AI replicating the way we talk, but also how we look. From videos of an animated Tom Cruise to convincing photos of a Balenciaga-wearing Pope (7), advanced deepfake videos and prompt-generated images from AI systems like DALL-E are becoming easier to create by the day (8). While the most prominent use of this technology is currently in the form of harmless memes, it can and has been used for more sinister means. Women across the world have had their faces used in non-consensual deepfake pornography, often as a form of revenge or blackmail (9). Furthermore, a fabricated video of Volodymyr Zelensky surrendering to Vladimir Putin that spread on social media last year proves AI’s unsettling potential in political disinformation (8). While fakes like that of Zelensky may have been taken down quickly due to easily identifiable tells, in many cases the damage has already been done the moment people see these videos or images. Mistrust in the news is heightened and real evidence can be accused of being AI generated, a strategy already implemented by Donald Trump to dismiss evidence of his misogyny (8). Although the current usage of this technology is concerning enough, the degradation of truth within society will only worsen as these replicants become increasingly accurate and faster to produce (8). Still, it is the ability for AI to complete jobs once thought to be uniquely human that will result in the largest change to the current status quo. Latest estimates from Goldman Sachs state that close to 300 million jobs globally could be automated by the current AI wave (10). The threat of job losses due to automation is far from new, stretching all the way back to 1811 with the infamous Luddites protesting factory machines (11). However, generative AI is placing a greater variety of jobs in jeopardy due to its ability to exude human creativity, giving rise to what Stanford Professor Victor R. Lee entitles an “authenticity crisis” (12). One of those jobs is that of writers. A common phrase amongst movie reviewers today is “this could have been written by an AI”. While usually used as a jab against the latest Marvel movie, large language models like Chat GPT that are capable of identifying and mimicking patterns in writing make it more than just a joke. Amongst calls for better conditions for screenwriters, a key demand from the Writers Guild of America in this year's Los Angeles writers’ strike was that AI will not be used to write or rewrite scripts (13). When you combine the growing authenticity of these AI with the greedy desires of major studios, it is not a far cry to suggest that producers may use AI to quickly generate scripts for generic soap operas and cash grab Netflix movies, leaving the human creatives to simply ‘clean-up’ these stories at a cut pay rate. Despite all these concerns, generative AI does have the ability to immeasurably improve society. The capacity of this technology to increase workplace efficiency (10), accelerate scientific progress (14) and constantly amuse us with clips of a rapping Joe Biden is undeniable. With the cat out of the bag, innovation in these areas cannot nor should not be halted completely. However, if sci-fi movies have taught me anything useful, it’s that we should not be blinded by the potential of scientific progress. Whether it be through governmental action to regulate the use of AI in industry or the scientific development of better deepfake-spotting technology to help stifle disinformation, implementing safeguards around AI is crucial in avoiding its “ethical debt” (15). Whilst looking to the world of science fiction as an indication of our future may be a bit far-fetched, it may also be a needed reminder of the world scientists should try not to replicate. References Tong A. AI company restores erotic role play after backlash from users ‘married’ to their bots [Internet]. The Sydney Morning Herald. 2023 [cited 2023 May 14]. Available from: https://www.smh.com.au/world/north-america/ai-company-restores-erotic-roleplay-after-backlash-from-users-married-to-their-bots-20230326-p5cvao.html Clarke L. ‘I learned to love the bot’: meet the chatbots that want to be your best friend. The Observer [Internet]. 2023 Mar 19 [cited 2023 May 14]; Available from: https://www.theguardian.com/technology/2023/mar/19/i-learned-to-love-the-bot-meet-the-chatbots-that-want-to-be-your-best-friend The rise and fall of replika [Internet]. [cited 2023 May 14]. Available from: https://www.youtube.com/watch?v=3WSKKolgL2U Eisikovits N. AI isn’t close to becoming sentient – the real danger lies in how easily we’re prone to anthropomorphize it [Internet]. The Conversation. 2023 [cited 2023 May 14]. Available from: http://theconversation.com/ai-isnt-close-to-becoming-sentient-the-real-danger-lies-in-how-easily-were-prone-to-anthropomorphize-it-200525 Cole S. ‘My ai is sexually harassing me’: replika users say the chatbot has gotten way too horny [Internet]. Vice. 2023 [cited 2023 May 14]. Available from: https://www.vice.com/en/article/z34d43/my-ai-is-sexually-harassing-me-replika-chatbot-nudes ‘My wife is dead’: How a software update ‘lobotomised’ these online lovers. ABC News [Internet]. 2023 Feb 28 [cited 2023 May 14]; Available from: https://www.abc.net.au/news/science/2023-03-01/replika-users-fell-in-love-with-their-ai-chatbot-companion/102028196 How to spot an ai-generated image like the ‘balenciaga pope’ [Internet]. Time. 2023 [cited 2023 May 14]. Available from: https://time.com/6266606/how-to-spot-deepfake-pope/ Wong M. We haven’t seen the worst of fake news [Internet]. The Atlantic. 2022 [cited 2023 May 14]. Available from: https://www.theatlantic.com/technology/archive/2022/12/deepfake-synthetic-media-technology-rise-disinformation/672519/ Atillah IE. AI could make deepfake porn an even bigger threat for women [Internet]. euronews. 2023 [cited 2023 May 14]. Available from: https://www.euronews.com/next/2023/04/22/a-lifelong-sentence-the-women-trapped-in-a-deepfake-porn-hell Toh M. 300 million jobs could be affected by latest wave of AI, says Goldman Sachs | CNN Business [Internet]. CNN. 2023 [cited 2023 May 14]. Available from: https://www.cnn.com/2023/03/29/tech/chatgpt-ai-automation-jobs-impact-intl-hnk/index.html McClelland C. The impact of artificial intelligence - widespread job losses [Internet]. IoT For All. 2023 [cited 2023 May 14]. Available from: https://www.iotforall.com/impact-of-artificial-intelligence-job-losses Hollywood writers are on strike over an AI threat that some are warning is coming for you next. ABC News [Internet]. 2023 May 5 [cited 2023 May 14]; Available from: https://www.abc.net.au/news/2023-05-06/hollywood-writer-s-strike-over-pay-and-artificial-intelligence/102296704 Lee VR. Generative AI is forcing people to rethink what it means to be authentic [Internet]. The Conversation. 2023 [cited 2023 May 14]. Available from: http://theconversation.com/generative-ai-is-forcing-people-to-rethink-what-it-means-to-be-authentic-204347 The AI revolution in science [Internet]. [cited 2023 May 14]. Available from: https://www.science.org/content/article/ai-revolution-science Fiesler C. AI has social consequences, but who pays the price? Tech companies’ problem with ‘ethical debt’ [Internet]. The Conversation. 2023 [cited 2023 May 14]. Available from: http://theconversation.com/ai-has-social-consequences-but-who-pays-the-price-tech-companies-problem-with-ethical-debt-203375 Previous article Next article back to MIRAGE
- Designing the perfect fish | OmniSci Magazine
< Back to Issue 7 Designing the perfect fish by Andy Shin 22 October 2024 edited by Luci Ackland illustrated by Esme MacGillivray Fish are the oldest known vertebrates, with the earliest fossil evidence dating back to the lower Cambrian period almost 530 million years ago (Shu et al., 1999). Since their inception, fish have exhibited a variety of different physical and behavioural traits to best exploit their environments. Over time, the effectiveness of these traits will be tested through competitive pressures or environmental factors. This raises a rather silly but nonetheless interesting question; if we could design a ‘frankenfish’ using features from other fish, what would the best combination of traits be for our modern oceans? Will older trends still work today? Is there a fish now that is already perfect? To help us answer this question, we will need to set a few ground rules: The idea of a ‘perfect’ animal is incredibly subjective and does not follow any known ecological frameworks. For this thought experiment, our ‘frankenfish’ will need to be able to manage the impacts of climate change and global fisheries. We will assume that the frankenfish must compete with existing species in the ocean. We can choose where we initially release our fish. Other than a rapidly warming ocean, we will assume no catastrophic extinction level event. We will assume that our frankenfish will survive long enough to reproduce at least once, ensuring the initial population is allowed to grow in size. Considerations Thermal tolerance With mean ocean sea surface temperatures predicted to increase by 1-2 degrees Celsius in the next century (Mimura, 2013), we should first design our fish after more tropical or temperate species. If sea surface temperatures become too high, our new fish could move towards the poles. This phenomenon is known as a range shift (Rubenstein et al., 2023) and has already been performed by many different marine species in recent years. When looking at the larval stages of different marine organisms, those that live in higher temperatures are generally better-equipped to deal with changes in the surrounding temperature (Marshall & Alvarez-Noriega, 2020). Trophic position Although it would be fun to simply create a new apex predator, we will need to think of trade-offs between energy expenditure, energy requirements and food availability. As a general rule of thumb, only 10% of caloric energy is transferred through each trophic level (Lindeman, 1942). Essentially, this means an organism at the top of the food chain will need to consume thousands of different organisms over its lifetime. Likewise, a lower-order organism will likely be a food source for a higher one but require less total energy to grow and reproduce over its lifetime. Essentially, there will be more room in the environment for lower-order fish, meaning more individuals can be placed, increasing the chance of successful future reproductive events. Life history and reproductive strategy In the world of ecology, species can broadly be categorised into 2 groups based on life history strategies: r-selected and k-selected species (Pianka, 1970). R-selected species tend to produce large numbers of offspring, develop quickly, and have higher rates of offspring mortality. Likewise, k-selected species develop slower, have less offspring but have higher rates of offspring survivorship. Group behaviours Fish often display group behaviours known as schooling and shoaling. Shoaling refers to a congregation of fish, whilst schooling requires coordinated movement of fish in the same direction. By grouping together, fish have less individual risk of being eaten by a predator and the group’s ability to sense danger is also heightened. Furthermore, schooling behaviour can reduce the energy an individual fish spends whilst swimming by 20% (Marras et al., 2014). Group behaviour may also lead to confusing an inexperienced predator (Magurran, 1990), though many modern predator species have adaptations to take advantage of shoals and schools. There are some drawbacks to group behaviour. Firstly, fish will have access to less food individually as enough food will need to be distributed across the group. Secondly, groups which grow too large attract large numbers of predators and lead to ‘bait balls’, which is essentially a floating buffet for any larger animal. Group behaviour is incredibly common in lower-order fish but is also exhibited in higher order predators such as Tuna and some shark species. It is estimated that almost half of all fish species will partake in group behaviour at some point in their lifecycle. Scales, Plates and Skin The structure of skin has implications for the hydrodynamics of an organism, influencing the level of lift and drag. The type of skin will also influence protection from parasites and predators. We will briefly discuss two types of scales, but other specialised scales exist. The skin of cartilaginous fish (sharks and rays) is composed of microscopic interlocking teeth-like structures known as placoid scales. The unique design of placoid scales facilitates the formation of small whorls whilst moving, reducing the drag experienced by the fish (Helfman et al., 2009, pp. 23–41). Placoid scales also act as a parasite deterrent, comparable to antifouling designs in modern cargo ships. Alternatively, many teleosts (bony fish) are covered in larger (non-microscopic), thinner scales known as leptoid scales (Helfman et al., 2009, pp. 23–41). These are further differentiated into circular and toothed scales (Helfman et al., 2009, pp. 23–41). Circular scales are smoother and uniformed, whilst toothed scales are rougher. Similar to placoid scales, leptoid scales reduce drag experienced by the fish (Roberts, 1993). Additionally, leptoid scales can be highly reflective, allowing for a unique form of camouflage known as silvering (Herring, 2001). Another thing to consider is colour. Red light is almost invisible past 40 metres of depth (National Oceanic and Atmospheric Association, n.d.), whilst blues and greys can. provide better camouflage from predators above and below you through countershading (Ruxton et al., 2004). Extra features – toxins, slime and light These are niche defence mechanisms which reduce the risk of predation. When agitated, Hagfish are able to release a thick, quickly expanding mucus from their skin, blocking the gills of an attacking fish (Zeng et al., 2023). Hagfish are only able to remove excess mucus on their skin by creating a knot with their own body (Böni et al., 2016), which is possible thanks to their eel-like shape. This design may not translate well when creating our own perfect fish, as the elongated shape limits it to the bottom of the ocean (Friedman et al., 2020). Other fish, such as some species of pufferfish, house bacteria in various organs that produce toxins which pool in livers and ovaries. A downside with toxins is that they only work if an attacker is already aware of their effect, meaning at least 1 pufferfish was consumed in the past. Furthermore, some fish species can ignore the effect of certain toxins. Toxin-producing bacteria is acquired through diet, which could limit the dietary range of our frankenfish. Other species of fish such as lionfish, stonefish and some catfish contain specialised venom glands which release toxins along the spines of their fins, which is considered a more efficient delivery method. Even without toxins, sharper fins can act as a deterrent for predators from swallowing you whole. Fish living in deeper waters tend to display bioluminescence, which causes them to produce light with the help of bacteria. This has numerous benefits including startling predators, camouflage, attracting food, and in unique cases allows an animal to see red pigments deep underwater (Young & Roper, 1976; Herring & Cope, 2005). As a downside, humans tend to exploit bioluminescence and use it to find large groups of fish and squid. Past and current champions The armoured fish The armoured fish, known as Placodermi, were a widespread group of fish who were prominent during the Devonian period (419 – 359 mya). The Placoderms are subdivided into 8 orders based on body shape characteristics, the most successful of which was known as Arthrodira. Species in Arthrodira occupied a variety of different niches from apex predators to detrital feeders, but all shared the common feature of jointed armour plates near the neck and face. The Placoderms were never outcompeted in their 60-million-year run. Instead, their time on Earth was cut short by multiple catastrophic events associated with the Late Devonian extinction. This could suggest that without random chance, the Placoderms would never have been dethroned. Sharks Sharks emerged at a similar time to the Placoderms but managed to survive the Late Devonian extinction events. Sharks have a cartilaginous skeleton as well as electromagnetic receptors known as Ampullae of Lorenzini, which are used to detect prey activity. The body plan of sharks has stayed relatively consistent over the last 400 million years, and they’ve managed to survive various extinction level events. The only issue with sharks is their value to humans, leading to millions of sharks being harvested for fins each year. Sharks are a k-selected species and produce only a handful of young. Most sharks deposit a handful of eggs which are protected by a casing and filled with yolk, increasing the fitness of a successful juvenile but also increasing the chance of predation removing it from the gene pool. Smaller egg clutches also mean the loss of a young shark has a higher relative impact on a population compared to a mass spawning species. Bristlemouths and Lanternfish These are similar families of fish and are some of the most abundant vertebrates on the planet. Unlike sharks, these fish are R-selected. Otolith (fish ear bone) samples suggest both families rose to prominence at least 5 million years ago (Přikryl & Carnevale, 2017; Schwarzhans & Carnevale, 2021) due to a massive bloom in phytoplankton. Out of these 2 groups, the Bristlemouths are the most abundant. Although survey data from the deep ocean is rare, prior studies revealed between 70-80% of all deep-sea fish were a variation of a Bristlemouth (Sutton et al., 2010). Despite their abundance, not too much is known about the Bristlemouth due to the depths they inhabit; 1000- 2000 metres. Meanwhile, Lanternfish are responsible for displaying a rising and falling ‘false sea floor’ in early sonar technology, known as the Deep Scattering Layer (Carson et al., 1951/1991). Movement of the layer is attributed to Diel Vertical Migration, a phenomenon where fish will move up and down the water column at certain times of day to avoid predation (Ritz et al., 2011). Constructing our fish Despite the historical success of the Placoderms, current trends in prey behaviours and morphology means armoured jaws are unlikely to be very useful in modern oceans (Bellwood et al., 2015). Furthermore, armoured plates will be heavier compared to scales or cartilage, meaning excess energy will have to be gathered via predation. Given that the oceans are abundant in second-order consumers such as zooplankton and planktotrophic fish, it may be worthwhile to make our new fish a third-order consumer. The sheer abundance of bristlemouths and lanternfish should make up for the inefficiencies of higher trophic levels. Habitat-wise, our new fish should adopt a pelagic (open ocean) lifestyle to best take advantage of the abundant smaller prey animals. When thinking of behaviours, our fish taking a nocturnal approach would work best to exploit the previously mentioned diel vertical migration behaviours seen in bristlemouths and lanternfish. This also allows for daytime predator avoidance, providing our fish the best possible chance to grow in numbers and proliferate. Given the trophic position of our fish, it is reasonable to also give it the capability to form schools and shoals. The group energy costs can be offset by the abundance of prey species, which also exhibit group behaviour. The best place to release our new fish would be somewhere in the mid-latitudes. This would make it more tolerant to higher temperatures and the percentage of global ocean area is only expected to increase in the near future (unless humans can somehow revert anthropogenic climate change). Our fish should be relatively slender and be red in colour. In theory, when combined with the depth of habitat, this will make our frankenfish almost invisible to organisms without additional specialised adaptations. Taking a page from the squid playbook, small bioluminescent regions along the top half of the fish would provide some further camouflage from predators looking down. The spines on our fish’s fins should be longer and sharper than average. For fun, we can also give our fish a venomous gland. Combining long spines with venom could dissuade some predators from eating our fish, through either awkward positioning or risk of poisoning. References Alexander, R. M. (2004). Hitching a lift hydrodynamically - in swimming, flying and cycling. Journal of Biology , 3 (2), 7. https://doi.org/10.1186/jbiol5 Bellwood, David R., Goatley, Christopher H. R., Bellwood, O., Delbarre, Daniel J., & Friedman, M. (2015). The Rise of Jaw Protrusion in Spiny-Rayed Fishes Closes the Gap on Elusive Prey. Current Biology , 25 (20), 2696–2700. https://doi.org/10.1016/j.cub.2015.08.058 Böni, L., Fischer, P., Böcker, L., Kuster, S., & Rühs, P. A. (2016). Hagfish slime and mucin flow properties and their implications for defense. Scientific Reports , 6 (1). https://doi.org/10.1038/srep30371 Carson, R. L., Zwinger, A. H., & Levinton, J. S. (1991). The sea around us . Oxford University Press. (Original work published 1951) Feld, K., Kolborg, A. N., Nyborg, C. M., Salewski, M., Steffensen, J. F., & Berg Sørensen, K. (2019). Dermal Denticles of Three Slowly Swimming Shark Species: Microscopy and Flow Visualization. Biomimetics , 4 (2), 38. https://doi.org/10.3390/biomimetics4020038 Friedman, S. T., Price, S. A., Corn, K. A., Larouche, O., Martinez, C. M., & Wainwright, P. C. (2020). Body shape diversification along the benthic– pelagic axis in marine fishes. Proceedings of the Royal Society B: Biological Sciences , 287 (1931), 20201053. https://doi.org/10.1098/rspb.2020.1053 Helfman, G. S., Collette, B. B., Facey, D. E., & Bowen, B. W. (2009). The Diversity of Fishes: Biology, Evolution and Ecology. In Copeia (2nd ed., Issue 2, pp. 23–41). John Wiley & Sons. Herring, P. (2001). The Biology of the Deep Ocean. In Oxford University Press eBooks . Oxford University Press. https://doi.org/10.1093/oso/9780198549567.001.0001 Herring, P. J., & Cope, C. (2005). Red bioluminescence in fishes: on the suborbital photophores of Malacosteus, Pachystomias and Aristostomias. Marine Biology , 148 (2), 383–394. https://doi.org/10.1007/s00227-005-0085- 3 Irigoien, X., Klevjer, T. A., Røstad, A., Martinez, U., Boyra, G., Acuña, J. L., Bode, A., Echevarria, F., Gonzalez-Gordillo, J. I., Hernandez-Leon, S., Agusti, S., Aksnes, D. L., Duarte, C. M., & Kaartvedt, S. (2014). Large mesopelagic fishes biomass and trophic efficiency in the open ocean. Nature Communications , 5 (1). https://doi.org/10.1038/ncomms4271 Lindeman, R. L. (1942). The Trophic-Dynamic Aspect of Ecology. Ecology , 23 (4), 399–417. https://doi.org/10.2307/1930126 Magurran, A. E. (1990). The adaptive significance of schooling as an anti predator defense in fish. Annales Zoologici Fennici , 27 (2), 51–66. Marras, S., Killen, S. S., Lindström, J., McKenzie, D. J., Steffensen, J. F., & Domenici, P. (2014). Fish swimming in schools save energy regardless of their spatial position. Behavioral Ecology and Sociobiology , 69 (2), 219–226. https://doi.org/10.1007/s00265-014-1834-4 Marshall, D. J., & Alvarez-Noriega, M. (2020). Projecting marine developmental diversity and connectivity in future oceans. Philosophical Transactions of the Royal Society B: Biological Sciences , 375 (1814), 20190450. https://doi.org/10.1098/rstb.2019.0450 Mimura, N. (2013). Sea-level rise caused by climate change and its implications for society. Proceedings of the Japan Academy, Series B , 89 (7), 281–301. https://doi.org/10.2183/pjab.89.281 National Oceanic and Atmospheric Association. (n.d.). Why are so many deep sea animals red in color?: Ocean Exploration Facts: NOAA Office of Ocean Exploration and Research . Oceanexplorer.noaa.gov . https://oceanexplorer.noaa.gov/facts/red-color.html Pianka, E. R. (1970). On r- and K-Selection. The American Naturalist , 104 (940), 592–597. https://doi.org/10.1086/282697 Přikryl, T., & Carnevale, G. (2017). Miocene bristlemouths (Teleostei: Stomiiformes: Gonostomatidae) from the Makrilia Formation, Ierapetra, Crete. Comptes Rendus Palevol , 16 (3), 266–277. https://doi.org/10.1016/j.crpv.2016.11.004 Ritz, D. A., Hobday, A. J., Montgomery, J. C., & Ward, A. J. W. (2011). Chapter Four - Social Aggregation in the Pelagic Zone with Special Reference to Fish and Invertebrates. Advances in Marine Biology , 60 (1), 161–227. https://doi.org/10.1016/B978-0-12-385529-9.00004-4 Roberts, C. D. (1993). Comparative morphology of spined scales and their phylogenetic significance in the Teleostei. Bulletin of marine science , 52 (1), 60-113. Rubenstein, M. A., Weiskopf, S. R., Bertrand, R., Carter, S., Comte, L., Eaton, M., Johnson, C. G., Lenoir, J., Lynch, A., Miller, B. W., Morelli, T. L., Rodriguez, M. A., Terando, A., & Thompson, L. (2023). Climate change and the global redistribution of biodiversity: Substantial variation in empirical support for expected range shifts. Journal of Environmental Evidence , 12 (7). https://doi.org/10.1186/s13750-023-00296-0 Ruxton, G. D., Speed, M. P., & Kelly, D. J. (2004). What, if anything, is the adaptive function of countershading? Animal Behaviour , 68 (3), 445–451. https://doi.org/10.1016/j.anbehav.2003.12.009 Schwarzhans, W., & Carnevale, G. (2021). The rise to dominance of lanternfishes (Teleostei: Myctophidae) in the oceanic ecosystems: a paleontological perspective. Paleobiology , 47 (3), 446–463. doi.org The rise to dominance of lanternfishes (Teleostei: Myctophidae) in the oceanic ecosystems: a paleontological perspective | Paleobiology | Cambridge Core The rise to dominance of lanternfishes (Teleostei: Myctophidae) in the oceanic ecosystems: a paleontological perspective - Volume 47 Issue 3 Shu, D.-G., Luo, H.-L., Morris, S. C., Zhang, X.-L., Hu, S.-X., Chen, L., Han, J., Zhu, M., Li, Y., & Chen, L.-Z. (1999). Lower Cambrian vertebrates from south China. Nature , 402 (6757), 42–46. https://doi.org/10.1038/46965 Sutton, T. T., Wiebe, P. H., Madin, L., & Bucklin, A. (2010). Diversity and community structure of pelagic fishes to 5000m depth in the Sargasso Sea. Deep Sea Research Part II: Topical Studies in Oceanography , 57 (24-26), 2220–2233. https://doi.org/10.1016/j.dsr2.2010.09.024 Young, R., & Roper, C. (1976). Bioluminescent countershading in midwater animals: evidence from living squid. Science , 191 (4231), 1046–1048. https://doi.org/10.1126/science.1251214 Zeng, Y., Plachetzki, D. C., Nieders, K., Campbell, H., Cartee, M., Pankey, M. S., Guillen, K., & Fudge, D. (2023). Epidermal threads reveal the origin of hagfish slime. ELife , 12 , e81405. https://doi.org/10.7554/eLife.81405 Previous article Next article apex back to
- Tip of the Iceberg: An Overview of Cancer Treatment Breakthroughs | OmniSci Magazine
< Back to Issue 7 Tip of the Iceberg: An Overview of Cancer Treatment Breakthroughs by Arwen Nguyen-Ngo 22 October 2024 edited by Zeinab Jishi illustrated by Louise Cen Throughout the history of science, there have been many firsts. Anaximander, a Greek scholar, was the first person to suggest the idea of evolution. Contrary to popular belief, the Montgolfier brothers were the pioneers of human flight by their invention of the hot air balloon, as opposed to another pair of brothers, the Wright brothers. In 1976, the first ever vaccine was created by an English doctor, who tested his theory in a rather peculiar manner that would not be approved by today’s ethics guidelines (Rocheleau, 2020). While there have been many extraordinary discoveries, there continue to be many firsts and many breakthroughs that have pathed the way for the next steps in research. In particular is research into ground-breaking treatments for cancer patients. 1890s: Radiotherapy (Gianfaldoni, S., Gianfaldoni, R., Wollina, U., Lotti, J., Tchernev, G., & Lotti, T. 2017) In the last decade of the 19th century, Wilhelm Conrad Rцntgen made the discovery of X-rays, drastically changing the medical scene for treating many diseases. From this discovery, Emil Herman Grubbe commenced the first X-ray treatment for breast cancer, while Antoine Henri Becquerel began to delve deeper into researching radioactivity and its natural sources. In the same year that Rцntgen discovered X-rays, Maria Sklodowska-Curie and Pierre Curie shared theirs vows together, and only three years later, discovered radium as a source for radiation. By then, during a time where skin cancers were frequently treated, this discovery had kick-started the research field into X-rays as well as the use of X-rays in the medical field. Scientists and clinicians have gained a greater understanding of radiation as treatment for diseases, but the research does not stop there and the advancement of radiotherapy only continues to thrive. 1940s: First Bone Marrow Transplant (Morena & Gatti, 2011) Following World War II, the physical consequences of war accelerated research into tissue transplantation. Skin grafts were needed for burn victims, blood transfusions needed ABO blood typing, and the high doses of radiation led to marrow failure and death. During this time, Peter Medawar started his research into rejection of skin grafts as requested by the Medical Research Council during World War II. It was a priority for the treatment of burn victims. Medawar had concluded that graft rejection was a result of an immunological phenomenon related to histocompatibility antigens. Histocompatibility antigens are cell surface glycoproteins that play critical roles in interactions with immune cells. They are unique to every individual and essentially flags one’s cell as their own, therefore making every individual physically unique. 1953: First Human Tumour Cured In 1953, Roy Hertz and Min Chiu Li used a drug, methotrexate, to treat the first human tumour — a patient with choriocarcinoma. Choriocarcinoma is an aggressive neoplastic trophoblastic disease, and can be categorised into two types — gestational and non-gestational (Bishop & Edemekong, 2023). The cancer primarily affects women, as it grows aggressively in a woman’s uterus (MedlinePlus., 2024). However, it can also occur in men as part of a mixed germ cell tumour (Bishop & Edemekong, 2023). Methotrexate is commonly used in chemotherapy as it acts as an antifolate antimetabolite that induces a cytotoxic effect on cells. Once methotrexate is taken up by cells, it forms methotrexate-polyglutamate, which in turn inhibits dihydrofolate reductase, an enzyme important for DNA and RNA synthesis (Hanood & Mittal, 2023). Therefore, by inhibiting DNA synthesis, the drug induces a cytotoxic effect on the cancerous cells. Since the first cure of choriocarcinoma using methotrexate, the drug has both been commonly used for chemotherapy and other applications, including as an immunosuppressant for autoimmune diseases (Hanoodi & Mittal, 2023). 1997: First ever targeted drug: rituximab (Pierpont, Limper, & Richards, 2018) Jumping ahead a few decades and 1997 was the year that JK Rowling published Harry Potter and the Philosopher’s Stone . It was also the year that the first targeted anti-cancer drug was approved by the U.S Food and Drug Administration (FDA), rituximab. Ronald Levy created rituximab with the purpose of targeting malignant B cells. B cells express an antigen – CD20 – which allows B cells to develop and differentiate. Rituximab is an anti-CD20 monoclonal antibody, meaning that it targets the CD20 antigens expressed on malignant B cells. It had improved the progression-free survival and overall survival rates of many patients who had been diagnosed with B cell leukemias and lymphomas (Pavlasova & Mraz, 2020). Much like the Philosopher’s Stone, you may consider rituximab to increase longevity of patients diagnosed with B cell cancers. Although Levy created this drug, his predecessors should not be ignored. Prior to his research and development of rituximab, research and development of monoclonal antibodies can be dated all the way back to the late 1970s (Pavlasova & Mraz, 2020). César Milstein and Georges J. F. Köhler developed the first monoclonal antibody in the mid-1970s, and first described the method for generating large amounts of monoclonal antibodies (Leavy, 2016). Milstein and Köhler were able to achieve this by producing a hybridoma – “ a cell that can be grown in culture and that produces immunoglobulins that all have the same sequence of amino acids and consequently the same affinity for only one epitope on an antigen that has been chosen by the investigator” (Crowley & Kyte, 2014). They had produced a cell with origins from a myeloma cell line and spleen cells from mice immunised against sheep red blood cells (Leavy, 2016). Going forward: CAR T Cells The most recent and exciting development in cancer research has been the development and usage of chimeric antigen receptor (CAR) T cells. CAR T cell therapy is a unique therapy customised to each individual patient, as the CAR T cells used are derived from the patient’s own T cells. The process involves leukapheresis, where the patient’s T cells are collected, and these collected T cells are then re-engineered to include the CAR gene. The patient’s own CAR T cells are produced, expanded and subsequently infused back into the patient. The first concept of CAR T cells to be described was in 1987 by Yoshihisa Kuwana and others in Japan. Following this, different generations of CAR T cells have now been developed and trialled, leading to the FDA’s first two approvals for CAR T cells (Wikipedia Contributors, 2024). This research avenue has only scratched the surface, with many individuals now exploring the best collection methods and how best to stimulate the “fittest” T cells - the apex predator of immune cells. A recent paper was published where CAR T cells were trialled as a second line therapy to follow ibrutinib-treated blood cancers. The phase 2 TARMAC study involved using anti-CD19 CAR T cells to treat patients with relapsed mantle cell lymphoma (MCL) who had been exposed to ibrutinib, a drug used to treat B cell cancers by targeting Bruton Kinase Tyrosine (BTK) found in B cells. The study showed that 80% of patients who had previous exposure to ibrutinib and were treated with CAR T cells as a second-line therapy achieved a complete response. Furthermore, at the 13-month follow-up, the 12-month progression free survival rate was estimated to be 75% and the overall survival rate to be 100% (Minson et al., 2024)! It is without a doubt that as humans, we are naturally curious creatures. It is with this curiosity that we have journeyed through the many scientific breakthroughs and innovations. And within each special nook and cranny of countless fields of science, from flight to evolution, from vaccines to cancer treatments, there have been multitudes of discoveries. There is no doubt that the number of innovations will only continue to grow. References Bishop, B., & Edemekong, P. (2023). Choriocarcinoma. StatPearls . Crowley, T., & Kyte, J. (2014). Section 1 - Purification and characterization of ferredoxin-NADP+ reductase from chloroplasts of S. oleracea . In Experiments in the Purification and Characterization of Enzymes (pp. 25–102). Gianfaldoni, S., Gianfaldoni, R., Wollina, U., Lotti, J., Tchernev, G., & Lotti, T. (2017). An overview on radiotherapy: From its history to its current applications in dermatology. Open Access Macedonian Journal of Medical Sciences, 5 (4), 521–525. https://doi.org/10.3889/oamjms.2017.122 Hanoodi, M., & Mittal, M. (2023). Methotrexate. StatPearls . Leavy, O. (2016). The birth of monoclonal antibodies. Nature Immunology, 17 (Suppl 1), S13. https://doi.org/10.1038/ni.3608 MedlinePlus. (2024). Choriocarcinoma. MedlinePlus . https://medlineplus.gov/ency/article/001496.htm#:~:text=Choriocarcinoma%20is%20a%20fast%2Dgrowing,pregnancy%20to%20feed%20the%20fetus Minson, A., Hamad, N., Cheah, C. Y., Tam, C., Blombery, P., Westerman, D., Ritchie, D., Morgan, H., Holzwart, N., Lade, S., Anderson, M. A., Khot, A., Seymour, J. F., Robertson, M., Caldwell, I., Ryland, G., Saghebi, J., Sabahi, Z., Xie, J., Koldej, R., & Dickinson, M. (2024). CAR T cells and time-limited ibrutinib as treatment for relapsed/refractory mantle cell lymphoma: The phase 2 TARMAC study. Blood, 143 (8), 673–684. https://doi.org/10.1182/blood.2023021306 Morena, M., & Gatti, R. (2011). A history of bone marrow transplantation. Haematology/Oncology Clinics, 21 (1), 1–15. Pavlasova, G., & Mraz, M. (2020). The regulation and function of CD20: An "enigma" of B-cell biology and targeted therapy. Haematologica, 105 (6), 1494–1506. https://doi.org/10.3324/haematol.2019.243543 Pierpont, T. M., Limper, C. B., & Richards, K. L. (2018). Past, present, and future of rituximab: The world’s first oncology monoclonal antibody therapy. Frontiers in Oncology, 8 , 163. https://doi.org/10.3389/fonc.2018.00163 Rocheleau, J. (2020). 50 famous firsts from science history. Stacker . https://stacker.com/environment/50-famous-firsts-science-history Wikipedia contributors. (2024, October 6). CAR T cell. In Wikipedia, The Free Encyclopedia . Retrieved October 17, 2024, from https://en.wikipedia.org/w/index.php?title=CAR_T_cell&oldid=1249695600 Previous article Next article apex back to
- From the Editors-in-Chief | OmniSci Magazine
< Back to Issue 4 From the Editors-in-Chief by Caitlin Kane, Rachel Ko, Patrick Grave, Yvette Marris 1 July 2023 Edited by the Committee Illustrated by Gemma van der Hurk Scirocco, summer sun, shimmering on the horizon. Salt-caked channels spiderweb your lips, scored by rivulets of sweat. Shifting, hissing sands sting your legs. You are the explorer, the adventurer, the scientist. A rusted spring, you heave forward, straining for each step, hauling empty waterskins. ----- The lonely deserts of science provide fertile ground for mirages. An optical phenomenon that appears to show lakes in the distance, the mirage has long been a metaphor for foolhardy hopes and desperate quests. The allure of a sparkling oasis just over the horizon, however, is undeniable. The practice of science involves both kinds of stories. Some scientists set a distant goal and reach it — perhaps they are lucky, perhaps they have exactly the right skills. Other scientists yearn to crack a certain problem but never quite get there. In this issue of OmniSci Magazine, we chose to explore this quest for the unknown that may be bold, unlucky, or even foolhardy: chasing the ‘Mirage’. Each article was written entirely by a student, edited by students, and is accompanied by an illustration that was created by a student. We, as a magazine, exist to provide university students a place to develop their science communication skills and share their work. If there’s a piece you enjoy, feel free to leave a comment or send us some feedback – we love to know that our work means something to the wider world. We’d like to thank all our contributors — our writers, designers, editors, and committee — who have each invested countless hours into crafting an issue that we are all incredibly proud of. We’d also like to thank you, our readers; we are incredibly grateful that people want to read student pieces and learn little bits from the work. That’s enough talking from us until next issue. Go and read some fantastic student writing! Previous article Next article back to MIRAGE
- Hidden Worlds: a peek into the nanoscale using helium ion microscopy | OmniSci Magazine
< Back to Issue 2 Hidden Worlds: a peek into the nanoscale using helium ion microscopy How do scientists know what happens at scales smaller than you can see using an optical microscope? One exciting method is the helium ion microscope which can be used to view cells, crystals and specially engineered materials with extreme detail, revealing the beauty that exists at scales too small to imagine! by Erin Grant 10 December 2021 Edited by Jessica Nguy and Hamish Payne Illustrated by Erin Grant The room is white, with three smooth walls and a fourth containing a small sample prep bench and high shelves. In the centre is a desk with three monitors. Next to it, occupying most of the space, is the microscope. Eight feet tall, a few feet wide, resting on an isolated floor surrounded by caution tape; “NO STEP” written in big block letters. Wires protrude from its tiered shape in orderly chaos. It is a clean, technological space; we are ready to explore science. A colleague and I are at the Materials Characterisation and Fabrication Platform of the University of Melbourne to finish off the last steps of a scientific paper I’ve been working on for many years. What I need, as the icing on the cake, is an image. What does my sample look like way down there, at the nanometre scale? Objects that are only nanometres in size are very hard to imagine when we’re used to thinking about metres, centimetres, or maybe even millimetres. We can see those length scales; they are part of our everyday. So, if you’re told that proteins have a diameter of a few nanometres, what does that mean? Well, to be precise, a nanometre is one-billionth of a metre. A human hair, the go-to yardstick for describing small things, has a width between 0.05-0.1 millimetres, which means that if you wanted to slice a hair into nanometre-wide strands you’d end up with nearly 100,000 pieces. Unfortunately, that’s still hard to visualise, but I’ve found that when working with and thinking about scales like this every day, you gain a sort of mental landscape that small things occupy, perhaps not entirely in context, but a space that contains an overall ‘vibe’ of smallness. I first noticed this when I worked in a laboratory that studies the tiny nematode worm C. elegans. These creatures are half a millimetre long, so although they are clearly visible to the naked eye, you need a microscope if you want to use them for science. After looking at these tiny creatures under magnification for many weeks, I came to recognise a feeling almost like being underwater. Upon putting my eyes to the lens, my focus would change from the macroscopic world around me, to one of minutiae. This change in perspective was quite immersive, I almost felt like I was inhabiting that small petri dish too. Working with samples even smaller than that now, I have carried some of that mental landscape with me. It now feels commonplace to imagine tiny systems, such as crystals or molecules which were once foreign. Much of this ability to visualise small things comes from the fact that in many cases, we can actually see them too. Physics has given us many tools with which we can peer into the smallest systems that exist. Helium ion microscopy, which I have come here to carry out, is one such technique. Dr Anders Barlow runs the helium ion microscope (HIM) at this facility. He warmly welcomes me and my colleague into the quiet room and jumps straight into an enthusiastic explanation of the machine – he can tell we’re not just here for some pictures, we want to know the inner workings of the microscope too. The HIM is a bit like the more mature surveyor of minuscule worlds: the electron microscope. While a regular optical microscope uses light to illuminate a sample, the electron microscope uses electrons. When they collide with the sample these electrons can bounce off or lose energy through several mechanisms. The lost energy can go into heat or light, but more usefully, the energy might be transferred to other electrons in the sample, called secondary electrons, ejecting them like a drill removing rocks from a quarry. The secondary electrons can be detected at each point across the sample as the beam is scanned over its surface. If more electrons are detected, then the pixel at that point is brighter compared to areas where there are fewer electrons. This tells you about the topography or composition of the sample at that point on its surface and provides a grayscale image. The HIM works in the same way, but it can generate sharper images because helium ions are heavier than electrons. This is important because the increased resolution of electron and helium ion microscopes is enabled by their quantum mechanical properties - namely the particle’s wavelength. You may have heard about the wave-like nature of light, which is a basic property of quantum mechanics. Particles also have a wavelength, called the de Broglie wavelength, which is inversely proportional to their mass - the heavier the particle, the shorter the wavelength. Having a shorter wavelength allows smaller details to be resolved because of a pesky phenomenon called diffraction. Diffraction occurs when a wave encounters a gap that is of the same or smaller width to its wavelength. When this happens, the wave that emerges on the other side will be spread out. You can think of the features that you want to image as being similar to gaps, so when light, or a particle, interacts with features that are very close together it will spread out, making those features blurry or even invisible. But if you can ensure that the wavelength is smaller than whatever feature you want to see, diffraction will not occur. Interestingly, physicists can actually take advantage of diffraction, and another phenomenon called interference, when they study periodic structures like crystals, but that’s a different article! So, because the de Broglie wavelength is very short for particles with mass, like electrons, an electron microscope can generate images of higher resolution than an optical microscope. Likewise, helium ions are even heavier than electrons because they are composed of one electron, two protons, and two neutrons. This makes them about 7,000 times heavier than a single electron (electrons are very light compared to protons and neutrons!) and consequently the images they can make are very sharp. With our samples ready, lab manager Anders loads my sample into the microscope and begins lowering the pressure in its internal chamber. Having a high vacuum – approximately a billion times lower than atmospheric pressure – is essential because it prevents air from interfering with the helium beam. Making the beam is perhaps the most miraculous part of this technological feat. At the very top of the microscope’s column, there’s a tiny filament shaped like a needle. Not like a needle, in fact, it is the sharpest needle we humans can make. To achieve this, the point is shaped by first extreme heat, and then some extreme voltages until the very tip is composed of only three atoms, reverently referred to as the trimer. Once the trimer has been formed, a high voltage is applied to the needle, resulting in an extreme electric field around the tip. Next, helium gas is introduced into the chamber and individual helium atoms are attracted towards the region of the high electric field. The field is so strong that it strips each helium atom of one electron, ionising it, and these now positively charged ions are repelled from each of the three atoms in the trimer as three corresponding beams. Using sophisticated focusing fields down the length of the column allows Anders to choose only one of the beams for imaging; we are creating a picture using a beam only one atom wide! Generating such a precise beam requires constant maintenance, but once Anders is satisfied with how it looks today, he begins scanning over a large area for what we’ve come to find: tiny proteins stuck to a diamond. In an experimental PhD, you often find yourself answering small incremental questions and today I want to know how well I’ve attached these proteins to my diamond and what the coverage looks like. Other measures have told me that I probably have a lot of them, but the best way to know is to have a look! That’s what Anders does for researchers at the university; he helps us find out whether we have done a good job putting things together or coming up with new techniques. This is something he loves about his job. “I love the exposure I get to many areas of science,” he says, “Imaging of all forms is ubiquitous in research, and the HIM is applicable to most fields, so we see samples from materials science, polymers, nanomaterials, and biomaterials, through to medical technologies and devices, to cell and tissue biology of human, plant and animal origin. I never get tired of seeing what new specimens may come through the lab door.” Unfortunately, the first images we see are very dark and washed out, like a photograph taken in low-light; not many secondary electrons are making it to the detector. To combat this, Anders uses a flood gun to stop charge build up on the surface of the diamond. When the helium ions create secondary electrons, they are ejected from the surface at low speeds. As electrons are negatively charged, the bombarded surface, which now lacks electrons, will become positive and the low energy secondary electrons will be attracted back to the surface instead of making it to the detector. In an electron microscope this is avoided by coating insulators, such as my diamond, with a conductive material like gold. If the surface is conductive, the positive charge that is left behind by the secondary electrons will be offset by electrons from the metallic coating that can flow towards the sudden appearance of positive charges. In this case, the ejected electrons can escape and be detected. However, a coating like this would reduce the resolution of the image; if you want to measure proteins that are twelve nanometres high, but you put a three-nanometre coating over them, you’ll lose a lot of the resolution! To get around this, the HIM uses the flood gun, which lightly sprays the surface with electrons of low energy as the helium beam passes over. This neutralises the surface and lets the secondary electrons escape in the same way as having a conductive layer. Once Anders turns on the flood gun, the contrast increases, allowing us to zoom in on a small region of the diamond, and there they are! Thousands of spherical proteins arranged neatly across the surface, only twelve nanometres in diameter. The sight is spectacular, only one try and we got what we came for. I am three years into a PhD and I’ve become very used to the feeling of disappointment that can accompany new experimental techniques. Things rarely work out the first time around, so to see those little spheres straight away was magical. Dotted across the diamond surface is another, extra, gem. To keep protein nice and happy, you must prepare it in a salty solution. So, when the protein was deposited, some regular table salt, NaCl, came too. We can see this salt in our images as crystals in two distinctive and very beautiful patterns which you can see in the images below. Protein on the surface of my diamond. Each small pale circle is one of these spherical proteins. The first image shows a large creeping pattern, reminiscent of snowflakes or tree roots, which spreads its soft fingers across several hundred nanometres. These crystals have taken on an amorphous pattern, where the crystal structure is broken up rather than being one continuous arrangement of the atoms. The second pattern however, shown in the right image, is what a continuous NaCl crystal looks like. When large enough crystals can form without becoming amorphous they look like precise cubes of various sizes all strewn about. One of my favourite aspects about looking at very small things, is how the patterns you see often mirror those at much larger scales. Look at a fingerprint and you’ll find mountains and valleys, or the roots of a tree and you’ll see a river system. Salt (NaCl) can take on a highly ordered structure shown by the cubic crystals (left) or an amorphous pattern similar in shape to tree roots (right). The astonishing images we get from this single session are all in a day’s work for Anders. He has imaged numerous kinds of cells on all manner of interesting substrates, patterned surfaces covered in needle-like protrusions, and many kinds of man-made materials. Today, there are vials on his prep-bench which, at first glance, look much like jars of hair. However, they are not hair, in fact they are strands of carbon fibre covered in various coatings, awaiting examination. ‘What are your favourite types of samples to look at?’ I want to know. “Cell biology is fascinating,” he says. “We’ve imaged red blood cells, pancreatic cells, stem cells, and various bacterial cells in this microscope. Most often researchers are interested in cell life and death, and the HIM assists by providing high resolution images of the structure and surface topography of the cell membrane.” Recently however, Anders has been helping researchers look at polymer materials for water filtration. “These are hierarchical porous structures, meaning they’re engineered to have pore sizes that vary through the membrane. It is stunning to see the materials at low magnification with large pores, and as we zoom in and in and in, to see new pore sizes become visible at each level, like a material engineered with a fractal quality.” One of the unique things about the HIM, Anders reminds me, is that it’s not just for imaging. Since helium ions are heavy, they carry a higher momentum than electrons. “We leverage the momentum of the ions to actually modify structures too. We can create new surface properties, new devices, new technologies, on a scale that is often too small for any other fabrication technique. This is some of the most exciting work.” If you know anyone who needs some nanoscale drilling done, then the HIM is your instrument! Today’s excursion across the university campus has been thrilling. I got what I came for and I’m excited to find other projects that could benefit from the insight and beautiful images the HIM can provide. Imaging instruments have always fascinated me and I’m looking forward to witnessing how far we will be able to delve into the nanoscale world in the years to come, thanks to the fast pace of engineering and physics research. Previous article back to DISORDER Next article
- Foreword by Dr Jen Martin | OmniSci Magazine
Forward by Dr. Jen Martin Issue 1: September 24, 2021 Image from Dr Jen Martin I’m sitting cross-legged on top of an enormous granite boulder which is intricately patterned with lichen and overlooking the forest. It’s pouring with rain and the weather matches my mood: I feel confused and lost even though I know this patch of forest better than the back of my hand. For years I’ve been working here night and day studying the behaviour of a population of bobucks or mountain brushtail possums. I know their movements and habits intimately, having followed some of these possums from the time they were tiny pink jellybeans in their mothers’ pouches. I love this forest and its inhabitants, and I feel privileged beyond words that I’ve had glimpses of the world through these animals’ eyes. But today I feel despondent. I chose ecology because I wanted to make a difference in the world: to protect animals and the habitats they depend on. And there’s no question field research like mine is essential to successful conservation. To protect wildlife, we need to understand what different species do and what they need. But there’s a missing link. The people with the power to make decisions to conserve nature aren’t the same people who will read my thesis or papers or go to my conference talks. And that’s why I feel so lost. Why have I never learned how to share my work with farmers, policy makers and voters, all of whom may never have studied science? Why didn’t anyone tell me: it’s not just the science that matters, it’s having the confidence and the skills to communicate that science to the people who need to know about it? "Science isn't finished until it is communicated." Sir Mark Walport Fast forward 15 years and I can see my afternoon of despair in the rain was a catalyst. It’s why I decided I needed to learn how to talk and write about science for different audiences. And why I decided the most useful contribution I could make as a scientist was not to do the research myself, but rather to teach other scientists how to communicate effectively about their work. Science communication has been my focus for more than a decade now. You only need think of the Covid-19 pandemic, or the biodiversity or climate crises to realise that scientists play a pivotal role in tackling many of the problems we face. But scientists need to do more than question, experiment and discover; even the most brilliant research is wasted if no one knows it’s been done or the people whose lives it affects can’t understand it. Sir Mark Walport, former Chief Science Advisor to the UK Government, said: ‘Science isn’t finished until it’s communicated’. And I couldn’t agree more. The more scientists who seek out every opportunity to share their work with others - and know how to communicate about their work in effective and engaging ways - the better. And that’s why I couldn’t be more excited about OmniSci. Science really is everywhere, and I invite you to revel in its complexity, wonder, and relevance in these stories. And to applaud the science students behind this magazine who want to share their knowledge and passion with you. These are the scientists the world needs. Dr Jen Martin (@scidocmartin) Founder and Leader of the UniMelb Science Communication Teaching Program (@UniMelbSciComm)
- Peaks and Perspectives: A Word from the Editors-in-Chief | OmniSci Magazine
Issue 7: Apex 22 October 2024 This issue surveys our world from above. So come along, and revel in the expansive view - have a read below! Editorial Peaks and Perspectives: A Word from the Editors-in-Chief by the Editors-in-Chief A word from our Editors-in-Chief. Corals A Coral’s Story: From thriving reef to desolation by Nicola Zuzek-Mayer Nicola sheds light on the devastating future faced by our coral reefs, with the effects of anthropogenic climate change far from having reached its peak. Humans vs Pathogens Staying at the Top of Our Game: the Evolutionary Arms Race by Aizere Malibek As nations vie for military supremacy, Aizere covers a microscopic competition between humans and the microbes evolving strategies against our defences. Seeing Space Interstellar Overdrive: Secrets of our Distant Universe by Sarah Ibrahimi Embark on an epic journey as Sarah explores the cosmic mysterious being revealed by NASA's James Webb Space Teloscope. Fossil Markets Fossil Markets: Under the Gavel, Under Scrutiny by Jesse Allen Diving into the wild world of fossil auctions, Jesse prompts us to ask: who is the real apex predator, the T-rex or hedge-fund billionaires? Cancer Treatments Tip of the Iceberg: An Overview of Cancer Treatment Breakthroughs by Arwen Nguyen-Ngo Icebreakers. Follow Arwen as she recounts the countless stories of the giants before us, who carved a path for our cancer research today. Triangles Pointing the Way: A Triangular View of the World by Ingrid Sefton Guiding us through land, seas and screens, Ingrid explores this humble 3-sided shape as a vital tool of modern society and its many fascinating uses. Anti-ageing Science Timeless Titans: Billionaires defying death by Holly McNaughton From billionaire-backed pills to young blood transfusion, Holly traverses the futuristic world of anti-ageing and asks: what happens when death is no longer inevitable? Brain-computer Implants Neuralink: Mind Over Matter? by Kara Miwa-Dale Would the ability to control a computer with your mind bolster possibilities or bring harm? Kara visualises a possible future under the Neuralink implant. Fish Morphology Designing the perfect fish by Andy Shin With a splash of creativity, Andy concocts the ultimate 'Frankenfish' by investigating the traits that allow fish to flourish in their aquatic environments. Commercial Aviation Soaring Heights: An Ode to the Airliner by Aisyah Mohammad Sulhanuddin Settle in and take a round trip with Aisyah through the evolution of commercial aviation, from the secrets of aircraft cuisine to the mechanics of staying afloat.
- A Frozen Odyssey: Shackleton’s Trans-Antarctic Expedition | OmniSci Magazine
< Back to Issue 6 A Frozen Odyssey: Shackleton’s Trans-Antarctic Expedition by Ethan Bisogni 28 May 2024 Edited by Rita Fortune Illustrated by Aisyah Mohammad Sulhanuddin The Heroic Age of Antarctic Exploration South of the 66th parallel lies a continent desolate and cruel, where the experiences of those who dared to challenge it are preserved in its ice. Antarctica was deemed Earth’s final frontier by 19th-century explorers, and at the cusp of the 20th century, the ‘Heroic Age of Antarctic Exploration’ was underway (Royal Museums Greenwich, n.d. a). Those who answered the call of the wild, to face the polar elements, would be remembered as heroes. Among the pantheon of Antarctic explorers, none are more celebrated than Sir Ernest Shackleton. An Irishman whose name became synonymous with adventure and peril, Shackleton emerged at the forefront of Britain’s polar conquests. During his Nimrod expedition to reach the magnetic South Pole, Shackleton and his crew found themselves within 100 miles of their goal—only to be thwarted by their human needs (Royal Museums Greenwich, n.d. b). His ambition outmatched the capabilities of those he commanded, so they withdrew for want of survival. Despite the supposed failure of the two-year expedition, Shackleton’s romanticism of exploration, leadership, and unwavering optimism earned him a knighthood in 1909 (Royal Museums Greenwich, n.d. b). In the years following, as other explorers performed increasingly remarkable polar feats, Shackleton was left in limbo. It was during this time that an impossibly ambitious expedition was put forward to him. The plan was as follows: a crew would sail a wooden barquentine, the Endurance, into the Weddell Sea, and land on the Antarctic coast. There, the men would split into groups, and Shackleton would pursue a daring transcontinental journey across Antarctica (Smith, 2021). Despite the questionable feasibility of this plan, a benefactor named James Caird sought to help fund the expedition (Smith, 2021). Thus, these plans were translated into reality, and with a finalised crew of 27, the Endurance was set to sail under the helm of New Zealand captain Frank Worsley. On August 1st, 1914, the Endurance departed Plymouth (PBS, 2002). Explorers of the Antarctic, from left: Ronald Amundsen, Sir Ernest Shackleton, Robert Peary (Antarctica 21, 2017) The Imperial Trans-Antarctic Expedition Into the Weddell Sea, December 5th, 1914 After their momentary recess in South Georgia, and the recent pickup of a stowaway, the Grytviken whaling station remained the crew's last semblance of civilisation (PBS, 2002). Shackleton was well aware of the challenges that loomed ahead—notorious for its hostility, the Weddell Sea was Antarctica’s first line of defence (Shackleton, 1919). In the coming days, the Endurance encountered pack ice, severely slowing its progress. A nightmarish phenomenon for any explorer, pack ice was an abundant drift of sea ice no longer connected to land. While plentiful, navigating it was not impossible—it only required patience, caution, and an intuitive hint of wisdom. But even with worsening conditions, Shackleton proceeded into unclear waters (Shackleton, 1919). The Endurance in the Weddell Sea (Hurley, 1914) Icebound, January 18th, 1915 The Endurance was again ensnared in ice, and this time the ship would not budge. Plagued by regret in pushing ahead, but desperate to break free, Shackleton ordered his men to cease routine. Once again, his ambition outpaced his capabilities, but Shackleton was also a man of determination. They would wait until an opening cleared (Shackleton, 1919). The ship began to drift northward with the ice, but as months passed, so too did any hope of landing. Time was running out, and with winter approaching, the Endurance would soon be engulfed by the long polar night (PBS, 2002). For this expedition to succeed, the crew needed to remain optimistic. A brotherhood formed on the ice, with theatre plays and celebrations to ease their dire worries. The eerie creak of the hull did not deter them from trekking the very ice that imprisoned them. The ship’s Australian photographer, Frank Hurley, captured these moments of perseverance on photographic plates, including the hauntingly beautiful Endurance beset amongst the snow (Shackleton, 1919). The Endurance in the night (Hurley, 1915) Abandon Ship, October 27th, 1915 True to its name, the Endurance weathered the dark winter months. But despite the comfort of a newly rising sun, disaster did not fade with the darkness. A catastrophic ice shift had violently imploded the ship’s hull, and with its fate sealed, the Endurance would not hold. Shackleton gave the order to abandon ship (Shackleton, 1919). Any hope of the expedition continuing was now lost alongside the Endurance , which was silently withering on the ice. Though this was not Shackleton’s first time in Antarctica, nor was it his first disastrous expedition. Stations of emergency supplies established by himself and other explorers were scattered across the islands of the Weddell Sea, each offering glimmers of hope. However, at over 500 kilometres away, they all required a potentially fatal journey (Shackleton, 1919). Frank Wild overlooking the wreck of the Endurance (Hurley, 1915) Ocean Camp, November 1st, 1915 A plan was conjured—they would march across the unforgiving ice, bringing themselves to one of the few sanctuaries along the Antarctic Peninsula. Concerns of risk from Captain Worsley fell on deaf ears; undeterred, Shackleton knew waiting was futile (Worsley, 1931). Leading up, a difficult decision was made to conserve the crew’s rations. Mrs. Chippy, the beloved ship cat of carpenter Harry McNish, was to be killed amongst the other animals (Canterbury Museum, 2018). Although believing it necessary, Shackleton’s remorseful orders to cull the animals aboard had cast a shadow over his leadership (Scott Polar Research Institute, n.d.). The march soon commenced, but horrendous conditions had led the men into a frozen labyrinth. After a pace of only a kilometre a day, the march was abandoned. The crew instead erected ‘Ocean Camp’, and were to wait for the ice to clear a path for their lifeboats (PBS, 2002). Weeks in, the crew's evening was interrupted by the ghostly wailing of the Endurance wreck . Beckoning in the distance, the men gathered to watch its final breaths. On November 21st, the ice finally caved in, and the Endurance was swallowed into the forsaken depths of the Weddell Sea (Worsley, 1931). Ocean Camp (Hurley, 1915) The Rebellion on the Ice, December 27th, 1915 With the crew’s last tether to the world severed, a depression had settled over the camp. Now dragging their lifeboats to open water, a quiet but persistent discontent was beginning to grow. Most of the crew still admired Shackleton as their resolute leader, but some were beginning to lose faith. A frustrated and grieving McNish made his stand, arguing that the loss of the Endurance had nullified Shackleton's command. Shackleton, furious but sympathetic, was able to successfully de-escalate the situation (Scott Polar Research Institute, n.d.). The mutiny was short-lived, but McNish was now under Shackleton's watchful eye. He knew that he would have to inspire hope, and that a rift in the crew would only prompt death. Dragging the lifeboats (Hurley, 1915) Elephant Island, April 14th, 1916 With three lifeboats in possession, a proposal to island-hop was presented. McNish had spent his time reinforcing the boats for open waters, and after careful deliberation, a destination was chosen. Elephant Island was a barren, windswept landscape—a false sanctuary harbouring an inhospitable environment. Landing there was not Shackleton’s first choice, but a fast approaching winter left no alternative (Shackleton, 1919). With Elephant Island looming over the horizon, the boats set forth. Battling the arduous sea, one of the lifeboats, the Dudley Docker , was torn away from the rest during an unprecedented storm. Fading into the vast darkness, the men aboard were presumed dead. No amount of enthusiasm from Shackleton could lift the crew's spirits, who were now delirious and grief stricken (Fiennes, 2022). The following day, a landing was imminent. Nearing the shore, a boat was noticed soaring in the distance. The Dudley Docker pierced through the waves—the crew still alive and following in hot pursuit. Ecstatic and revived with hope, landfall was made. A major milestone had been reached; the crew were now unified and ashore for the first time since South Georgia (Fiennes, 2022). Unfortunately, Elephant Island’s taunting winds carried no whispers of hope. The silence was apparent: this island would be their grave unless contact was made with civilisation. A party must be formed, one that would take the risk and sail into the heavy seas of the Southern Ocean (Shackleton, 1919). The shores of Elephant Island (Hurley, 1916) The Voyage of the James Caird, April 24th, 1916 Shackleton selected a route to a South Georgia whaling station neighbouring the one they had departed in 1914—a harrowing 1500 kilometres across notoriously restless seas. In one of their modified lifeboats, they were to utilise the prevailing westerlies to attempt an impossible sailing feat (Pierson, n.d.). Six men were selected to commander the James Caird : Shackleton, Worsley, McNish, Crean, Vincent, and McCarthy. As the James Caird set sail, a vast ocean of uncertainty lay between Elephant Island and South Georgia (Pierson, n.d.). The voyage was tortuous, with the men severely ill-prepared. From storm-fed waves to frigid winds, the James Caird and those aboard were unlikely to survive the journey. At each turn, however, the determined men managed to stay afloat and push ahead. 17 days passed before the dominant mountains of South Georgia came into view (PBS, 2002). Shackleton, fearing his men would not survive another day at sea, hastened a plan to land on the rocky western shores (Pierson, n.d.). The six men found themselves on the wrong end of the island to the station, and James Caird was in no state to navigate the coast. The capable individuals would have to perform the first trans-island crossing of South Georgia—a far cry from their original ambitions, but daring nonetheless. With only Shackleton, Worsley, and Crean able to attempt the task ahead, McNish, Vincent, and McCarthy were left to establish ‘Peggotty Camp’ in the landing cove (Pierson, n.d.). Waving goodbye to the James Caird (Hurley, 1916) The Crossing of South Georgia, May 10th, 1916 The three men began their journey northward towards the Stromness whaling station. Encountering menacing snow-capped peaks, the men were so close to potential rescue only to be divided by insurmountable odds. Needing to race the approaching night down a 3000-foot mountainside, a makeshift sled was constructed from their little equipment. Rocketing downhill, a rare moment of joy and exhilaration accompanied the men along their daredevilish tactics (Antarctica Heritage Trust, 2015). Exhausted and verging on collapse, the men were now nearing the outskirts of their destination. A whistle in the air had lured them closer, and on May 20th, 1916, contact was finally made. The men were tended to by the distraught station managers, and a rescue party was sent the following day to those abandoned at ‘Peggotty Camp’ (Pierson, n.d.). After multiple attempts to obtain a suitable vessel, the 22 remaining souls holding steadfast on Elephant Island were finally rescued by the Yelcho on August 30th, 1916. Hope was not lost amongst them, as even in his absence their belief in Shackleton kept their spirits alive. Bringing their ordeal to a close, and without a man’s life lost, the crew’s troubles were left behind in the frozen Antarctic (Shackleton, 1919). The Yelcho arrives to rescue the crew (Hurley, 1916) Legacy Published in 1919, ‘South’, Shackleton’s autobiographical recount of the expedition, brought these remarkable stories into the limelight. However, records stricken from the novel hide some concerning truths. While omitting the incident regarding McNish’s mutiny, it was clear Shackleton resented him for introducing doubt during their time of turmoil. Despite his redemption during their voyage to South Georgia, Shackleton recommended McNish not be awarded the Polar medal—a decision still considered mistakenly harsh (Scott Polar Research Institute, n.d.). But despite his flaws and misjudgments, Shackleton was undoubtedly the optimistic and courageous leader you would seek in times of crisis. In 1922, aboard his final expedition to circumnavigate Antarctica, Shackleton suffered a fatal heart attack - and was buried in South Georgia. Regarded as a defining moment, his death signalled the end of the ‘Heroic Age of Antarctic Exploration’ (Royal Museums Greenwich., n.d. b). Exactly one century following, the Endurance was found preserved at the bottom of the Weddell Sea. Its mast still bearing its inscription, the ship remains an enduring remnant of a heroic past. This inspiring tale of survival continues to live on, as one of the greatest stories of human perseverance in the face of the elements. The crew of the Endurance (Hurley, 1915) References Antarctica 21. (2017). Famous Antarctic Explorers: Sir Ernest Henry Shackleton. Antarctica 21 . https://www.antarctica21.com/journal/famous-antarctic-explorers-sir-ernest-henry-shackleton/ Antarctica Heritage Trust (2015). Crossing South Georgia. Antarctic Heritage Trust. https://nzaht.org/encourage/inspiring-explorers/crossing-south-georgia/ Canterbury Museum (2018), Dogs in Antarctica: Tales from the Pack. Canterbury Museum https://antarcticdogs.canterburymuseum.com/themes/hardships Fiennes, R (2022). Remembering a Little-Known Chapter in the Famed Endurance Expedition to Antarctica. Atlas Obscura, https://www.atlasobscura.com/articles/shackleton-endurance-elephant-island Hurley, F. (1914-1916). Imperial Trans-Antarctic Expedition Photographic Plates. [Photographs]. National Library of Australia. https://www.nla.gov.au/collections/what-we-collect/pictures/explore-pictures-collection-through-articles-and-essays/frank PBS (2002). Shackleton’s Voyage of Endurance. PBS Nova. https://www.pbs.org/wgbh/nova/shackleton/1914/timeline.html Pierson, G (n.d.), Excerpt: The Voyage of the James Caird by Enerest Shackleton. American Museum of Natural History. https://www.amnh.org/learn-teach/curriculum-collections/antarctica/exploration/the-voyage-of-the-james-caird Royal Museums Greenwich. (n.d. a). History of Antarctic explorers. Royal Museums Greenwich. https://www.rmg.co.uk/stories/topics/history-antarctic-explorers Royal Museums Greenwich. (n.d. b). Sir Ernest Shackleton. Royal Museums Greenwich. https://www.rmg.co.uk/stories/topics/sir-ernest-shackleton Scott Polar Research Institute (n.d.). McNish, Carpenter. University of Cambridge, Scott Polar Research Institute. https://www.spri.cam.ac.uk/museum/shackleton/biographies/McNish,_Henry/ Shackelton, E (1919). South: The Endurance Expedition. Heinemann Publishing House Smith, M (2021). Shackleton's Imperial Trans-Antarctic Expedition. Shackleton. https://shackleton.com/en-au/blogs/articles/shackleton-imperial-trans-antarctic-expedition Worsley, F (1931). Endurance: An Epic of Polar Adventure. W. W. Norton & Co Previous article Next article Elemental back to
- Hiccups | OmniSci Magazine
< Back to Issue 2 Hiccups Evolution might be a theory, but if it’s evidence you’re after, there’s no need to look further than your own body. The human form is full of fascinating parts and functions that hold hidden histories - from the column that brought you a deep-dive into ear wiggling in Issue 1, here’s an exploration of why we hiccup! by Rachel Ko 10 December 2021 Edited by Katherine Tweedie and Ashleigh Hallinan Illustrated by Gemma Van der Hurk Hiccups bring a special brand of chaos to a day. It’s one that lingers, rendering us helpless and in suspense; a subtle, internal chaos of quiet frustration that forces us to drop what we’re doing to monitor each breath – in and out, in and out – until the moment they abruptly decide to stop. It’s an experience we’ve all had – one that can hit anyone at any time – and for most of us, hiccups are a concentrated episode of inconvenience; best ignored, and overcome. Yet, despite our haste to get rid of them when they interrupt our day, hiccups seem to have mystified humans for generations. Historically, the phenomenon has been the source of many superstitions, both good and bad. A range of cultures associate them with the concept of remembrance: in Russia, hiccups mean someone is missing you (1), while an Indian myth suggests that someone is remembering you negatively for the evils you have committed (2). Likewise, in Ancient Greece, hiccups were a sign that you were being complained about (3), while in Hungary, they mean you are currently the subject of gossip. On a darker note, a Japanese superstition prophesises death to one who hiccups 100 times. (4) Clearly, the need to justify everything, even things as trivial as hiccups, has always been an inherent human characteristic, transcending culture and time. As such, science has more recently made its attempt at objectively identifying a reason behind the strange phenomenon of hiccups. After all, if you take a step back and think about it, hiccups are indeed quite strange. Anatomically, hiccups (known scientifically as singultus) are involuntary spasms of the diaphragm (5): the dome-like sheet of muscle separating the chest and abdominal cavities. (6) The inspiratory muscles, including the intercostal and neck muscles, also spasm, while the expiratory muscles are inhibited. (7) These sudden contractions cause a rapid intake of air (“hic”), followed by the immediate closure of the glottis or vocal cords (“up”). (8) As many of us have probably experienced, a range of stimuli can cause these involuntary contractions. The physical stimuli include anything that stretches and bloats the stomach, (9) such as overeating, rapid food consumption and gulping, especially of carbonated drinks. (10) Emotionally, intense feelings and our responses to them, such as laughing, sobbing, anxiety and excitement, can also be triggers. (11) This list is not at all exhaustive; in fact, the range of stimuli is so large that hiccups might be considered the common thread between a drunk man, a Parkinson’s disease patient and anyone who watches The Notebook. The one thing that alcohol, (12) some neurological drugs (13) and intense sobbing (14) do have in common is that they exogenously stimulate the hiccup reflex arc. (15) This arc involves the vagal and phrenic nerves that stretch from the brainstem to the abdomen which cause the diaphragm to contract involuntarily. (16) According to Professor Georg Petroianu from the Herbert Wertheim College of Medicine, (17) many familiar home remedies for hiccupping – being scared, swallowing ice, drinking water upside down – interrupt this reflex arc, actually giving these solutions a somewhat scientific rationale. While modern research has successfully mapped out the process of hiccups, their purpose is still unclear. As of now, the hiccup reflex arc and the resulting diaphragmatic spasms seem to be effectively useless. Of the existing theories for the function of hiccups, the most prominent seems to be that they are a remnant of our evolutionary development, (18) essentially ‘vestigial’; in this case, a feature that once served our amphibian ancestors millions of years ago, but now retain little of their original function. (19) In particular, hiccups are believed to be a relic of the ancient transition of organisms from water to land. (20) When early fish lived in stagnant waters with little oxygen, they developed lungs to take advantage of the air overhead, in addition to using gills while underwater. (21) In this system, inhalation would allow water to move over the gills, during which a rapid closure of the glottis – which we see now in hiccupping – would prevent water from entering the lungs. It is theorised that when descendants of these fish moved onto land, gills were lost, but the neural circuit for this glottis closing mechanism was retained. (22) This neural circuit is indeed observable in human beings today, in the form of the hiccup central pattern generator (CPG). (23) CPGs exist for other oscillating actions like breathing and walking, (24) but a particular cross-species CPG stands out as a link to human hiccupping: the neural CPG that is also used by tadpoles for gill ventilation. Tadpoles “breathe” in a recurring, rhythmic pattern that shares a fundamental characteristic feature with hiccups: both involve inspiration with closing of the glottis. (25) This phenomenon strengthens the idea that the hiccup CPG may be left over from a previous stage in evolution and has been retained in both humans and frogs. However, the CPG in frogs is still used for ventilation, while in humans, the evolution of lungs to replace gills has rendered it useless. (26) Based on this information, it seems hiccupping lost its function with time and the development of the human lungs, remaining as nothing more than an evolutionary remnant. However, we cannot discredit hiccupping as having become entirely useless as soon as gills were lost. Interestingly, hiccupping has only been observed in mammals – not in birds, lizards or other air-breathing animals. (27) This suggests that there must have been some evolutionary advantage to hiccupping at some point, at least in mammals. A popular theory for this function stems from the uniquely mammalian trait of nursing. (28) Considering the fact that human babies hiccup in the womb even before birth, this theory considers hiccupping to be almost a glorified burp, intended to remove air from the stomach. This becomes particularly advantageous when closing the glottis prevents milk from entering the lungs, aiding the act of nursing. (29) Today, we reduce hiccups to the disorder and disarray they bring to our day. But, next time you are hit with a bout of hiccups, take a second to find some calm amidst the chaos and appreciate yet another fascinating evolutionary fossil, before you hurry to dismiss them. After that, feel free to eat those lemons or gargle that salty water to your diaphragm’s content. References Sonya Vatomsky, "7 Cures For Hiccups From World Folklore," Mentalfloss.Com, 2017, https://www.mentalfloss.com/article/500937/7-cures-hiccups-world-folklore. Derek Lue, "Indian Superstition: Hiccups | Dartmouth Folklore Archive," Journeys.Dartmouth.Edu, 2018, https://journeys.dartmouth.edu/folklorearchive/2018/11/14/indian-superstition-hiccups/. Vatomsky, "7 Cures For Hiccups From World Folklore". James Mundy, "10 Most Interesting Superstitions In Japanese Culture | Insidejapan Tours," Insidejapan Blog, 2013, https://www.insidejapantours.com/blog/2013/07/08/10-most-interesting-superstitions-in-japanese-culture/. Paul Rousseau, "Hiccups," Southern Medical Journal, no. 88, 2 (1995): 175-181, doi:10.1097/00007611-199502000-00002. Bruno Bordoni and Emiliano Zanier, "Anatomic Connections Of The Diaphragm Influence Of Respiration On The Body System," Journal Of Multidisciplinary Healthcare, no. 6 (2013): 281, doi:10.2147/jmdh.s45443. Christian Straus et al., "A Phylogenetic Hypothesis For The Origin Of Hiccough," Bioessays no. 25, 2 (2003): 182-188, doi:10.1002/bies.10224. Straus et al., "A Phylogenetic Hypothesis For The Origin Of Hiccough," 182-188. John Cameron, “Why Do We Hiccup?,” filmed for TedEd, 2016, TED Video, https://ed.ted.com/lessons/why-do-we-hiccup-john-cameron#watch. Monika Steger, Markus Schneemann, and Mark Fox, "Systemic Review: The Pathogenesis And Pharmacological Treatment Of Hiccups," Alimentary Pharmacology & Therapeutics 42, no. 9 (. 2015): 1037-1050, doi:10.1111/apt.13374. Lien-Fu Lin, and Pi-Teh Huang, "An Uncommon Cause Of Hiccups: Sarcoidosis Presenting Solely As Hiccups," Journal Of The Chinese Medical Association 73, no. 12 (2010): 647-650, doi:10.1016/s1726-4901(10)70141-6. Steger, Schneemann and Fox, "Systemic Review: The Pathogenesis And Pharmacological Treatment Of Hiccups," 1037-1050. Unax Lertxundi et al., "Hiccups In Parkinson’s Disease: An Analysis Of Cases Reported In The European Pharmacovigilance Database And A Review Of The Literature," European Journal Of Clinical Pharmacology 73, no. 9 (2017): 1159-1164, doi:10.1007/s00228-017-2275-6. Lin and Huang, "An Uncommon Cause Of Hiccups: Sarcoidosis Presenting Solely As Hiccups," 647-650. Peter J. Kahrilas and Guoxiang Shi, "Why Do We Hiccup?" Gut 41, no. 5 (1997): 712-713, doi:10.1136/gut.41.5.712. Steger, Schneemann and Fox, "Systemic Review: The Pathogenesis And Pharmacological Treatment Of Hiccups," 1037-1050. Georg A. Petroianu, "Treatment Of Hiccup By Vagal Maneuvers," Journal Of The History Of The Neurosciences 24, no. 2 (2014): 123-136, doi:10.1080/0964704x.2014.897133. Straus et al., "A Phylogenetic Hypothesis For The Origin Of Hiccough," 182-188. Cameron, “Why Do We Hiccup?” Michael Mosley, "Anatomical Clues To Human Evolution From Fish," BBC News, published 2011, https://www.bbc.com/news/health-13278255. Michael Hedrick and Stephen Katz, "Control Of Breathing In Primitive Fishes," Phylogeny, Anatomy And Physiology Of Ancient Fishes (2015): 179-200, doi:10.1201/b18798-9. Straus et al., "A Phylogenetic Hypothesis For The Origin Of Hiccough," 182-188. Straus et al., "A Phylogenetic Hypothesis For The Origin Of Hiccough," 182-188. Pierre A. Guertin, "Central Pattern Generator For Locomotion: Anatomical, Physiological, And Pathophysiological Considerations," Frontiers In Neurology 3 (2013), doi:10.3389/fneur.2012.00183. Hedrick and Katz, "Control Of Breathing In Primitive Fishes," 179-200. Straus et al., "A Phylogenetic Hypothesis For The Origin Of Hiccough," 182-188. Daniel Howes, "Hiccups: A New Explanation For The Mysterious Reflex," Bioessays 34, no. 6 (2012): 451-453, doi:10.1002/bies.201100194. Howes, "Hiccups: A New Explanation For The Mysterious Reflex," 451-453. [1] Howes, "Hiccups: A New Explanation For The Mysterious Reflex," 451-453. Previous article back to DISORDER Next article
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OmniSci Magazine is the University of Melbourne's science magazine, written by students. Read our recent issues and view the magnificent illustrations! Issue 7: apex Cover Art: Ingrid Sefton READ NOW Welcome to OmniSci Magazine OmniSci Magazine is a student-led science magazine and social club at UniMelb. We are a group of students passionate about science communication and a platform for students to share their creativity. Read More More from OmniSci Magazine Previous Issues Illustration by Louise Cen READ ISSUE 6 National Science Week 'SCIENCE IS EVERYWHERE' PHOTO/ART COMPETITION VIEW SUBMISSIONS
- Our Microbial Frenemies | OmniSci Magazine
Our Microbial Frenemies By Wei Han Chong How could it be that some of the smallest organisms known to mankind can hold so much influence and cause such calamity in our lives? The significance of these microorganisms have long eluded the greatest microbiologists. But has our perception of these microbes blinded us to their advantages, if any? Edited by Khoa Anh Tran & Tanya Kovacevic Issue 1: September 24, 2021 Illustration by Rachel Ko Throughout human history, diseases and plagues have amassed death tolls reaching hundreds of millions, if not billions. From the Black Death in the 14th century, which killed about 200 million people, or about 30–50% of Europe’s population, to outbreaks of tuberculosis and typhoid fever, resulting in 1.4 million and 200,000 deaths every year, respectively (1, 2, 3). It should come as no surprise then that we have long perceived these microorganisms as a threat to public health and have consequently sought to eradicate these microbes from our environment. But have we been looking at them the wrong way? First and foremost, we know very little about the microorganisms living around us. In bacterial species alone, some scientists have estimated around a billion species worldwide, though even this value is believed to be a gross underestimation (4). Before the germ theory, the most widely accepted theories were the spontaneous generation and miasma theories. Spontaneous generation was a simple theory, believing that living organisms could develop from nonliving matter, such as maggots developing from rotting flesh. The miasma theory, on the other hand, was more prevalent throughout both ancient and modern history. From this perspective, “toxic” vapours from rotting organisms or unsanitary locations were believed to have caused disease (5). This all changed with the germ theory of disease: an idea that would revolutionise our understanding of microorganisms for centuries to come. First theorised as “invisible seeds” by Italian scholar Girolamo Fracastoro in 1546, Fracastoro believed that these seeds could cause disease when spread from infected to healthy individuals (6). For the most part, the basis of the germ theory would continue to follow this logic of a specific microorganism, a “germ”, that could cause a specific disease when invading its host (7). Yet, it was not until nearly 200 years later that the field of microbiology would see huge developments. In 1861, French scientist Louis Pasteur had disproved the spontaneous generation theory by means of sterilisation and proper sealing of food items, which would prevent microbial growth (8). However, Louis Pasteur would not be the only one contributing to developments in microbiology. In 1884, German scientist Robert Koch would be the first to develop a classification system for establishing a causative relationship between a microorganism and its respective disease, effectively confirming the germ theory of disease (9). Even to this day, Koch’s system is still very much influential in microbial pathogenesis, albeit refined to a higher standard. Now known as Koch’s Molecular Postulates — as opposed to Koch’s Original Postulates — which is a model that places a greater emphasis on the virulence genes causing disease, rather than the microorganism itself (10). Today, while we have much to thank Pasteur and Koch for in laying the foundation of modern microbiology, undoubtedly one of the biggest discoveries in microbiology was the discovery of the human microbiota. When we think of microbial life, we usually think of diseases and plagues, cleanliness and dirtiness. Rarely do we ever consider the idea of microbes living inside and around us. Yet, even less so can we begin to comprehend the sheer number of microorganisms that live and proliferate all around ourselves. In our gastrointestinal tract, estimates suggest that there are some 100 trillion microorganisms encoding three million genes altogether, which is 130 times more than what we encode ourselves (11). Figure 1. Microbes in Food (25) So, what do we know about the microbiota; specifically, our microbiota? Firstly, we know that the microorganisms occupying our gut do not cause disease, under normal circumstances. Secondly, we know that they can provide us with a multitude of benefits, such as helping us digest complex organic molecules, and preventing invasion of foreign microbes by directly competing for resources and keeping the immune system stimulated. These are just a few of the advantages our microbial allies provide us. However, that is not to say that they pose no danger to ourselves either. Typically, these microorganisms are categorised into being in a beneficial, pathogenic or commensal relationship with its host. Beneficial microbes, or probiotics, are as the name suggests: these microbes typically provide some form of health benefit to the host and are usually non-pathogenic. Many of the bacterial species found in our gut lumen, for example, have the capability to digest cellulose. As such, without these microbes, digesting vegetables would be a much harder and less rewarding task. Most of the probiotics found in our microflora are of lactic acid bacteria origin and are most common in diets that incorporate fermented dairy products (12). Pathogenic microbes, on the other hand, mostly describe microbes of foreign origin. These microorganisms will infect and exploit the host’s cells, ultimately causing disease. Commensal microorganisms walk an interesting line, in comparison to beneficial and pathogenic microbes. This group of microbes encompasses all of the characteristics described above, depending on circumstance. This ranges from benefiting both the host and microbe, the microbe itself, or even causing disease within its host when given the opportunity. An example of a commensal microorganism is Escherichia coli, or E. coli. It is a bacterium that colonises our gastrointestinal tract as soon as we are born, where it fends off more than 500 competing bacteria species, thanks to its versatility and adaptations to our gut environment (13). Furthermore, the presence of E. coli along our gut epithelium helps to stimulate mucin production, inhibiting any foreign microbes from invading the epithelium (14). However, as is typical of a commensal organism, when given the chance, E. coli is capable of causing intestinal or extraintestinal disease in our bodies. Urinary tract infections due to E. coli are among the most common causes of a microflora-associated infection and often occur when the bacterium is allowed to enter the urinary tract via cross contamination with the anus, where E. coli is typically shed as part of the faeces (15). Typically, these beneficial and commensal bacteria are found all over our body. They can be found in our hair, on our skin, and as we have discussed, in our gut. Malassezia, for example, is a fungus that colonises our scalp, and is what causes dandruff in most people. While dandruff may be a nuisance to those who experience it, do the disadvantages necessarily outweigh the benefits? The presence of Malassezia on our scalps means that other, possibly dangerous, microorganisms will have to compete with Malassezia in order to invade. Additionally, the stimulation of our body’s defenses due to Malassezia aids in repelling foreign invaders (16). Staphylococcus aureus is another example of a commensal microbe, and an even better example of an opportunistic pathogen that can be found living harmoniously on our skin and nasal passages, helping us fend off other competing microbes just as Malassezia does on our scalp. However, when the skin is pierced, whether by means of injury or even medically through surgeries or treatments, the Staphylococcus bacteria will opportunistically attempt to invade and infect its host (17). As such, Staph infections and outbreaks are among some of the most common forms of hospital-related infections (18). Source: Thomas L Dawson, “What causes dandruff, and how do you get rid of it?” February 10, 2021, Ted-Ed video (19). Looking to the future, we have begun to see a spike in non-communicable diseases as opposed to microorganism-based diseases. These include most forms of heart diseases, cancers, diabetes, and others. Still, while the rise of non-communicable diseases is arguably a cause for concern, the return of long extinct diseases and antibiotic resistant pathogens may prove costly. Staph infections, as previously mentioned, are extremely common in hospital environments where continued usage of antibiotics such as penicillin or methicillin has produced a “super strain” of Staphylococcus that is resistant to most commercially available drugs (20). Currently, superbugs such as multidrug-resistant mycobacterium tuberculosis and methicillin-resistant Staphylococcus aureus are most common in healthcare settings, but community transmissions have become a concern (21). As such, with our current practices of antibiotic overprescriptions and continued reliance on sterilisation, future outbreaks of mutated and resistant pathogens may be inevitable. That being said, should we redefine what “clean and sterile” means to us? Should “sterile” necessarily be a microbe-free environment? Our perception of microbial life has consistently been “antibacterial” and believed to have been a threat to public health ever since the inception of the germ theory. However, the fact of the matter is that these microorganisms are unavoidable. There are microorganisms living all over us. Our fingers, our phones, even the soles on our shoes carry certain microorganisms. In hospital rooms, the composition of microbes is constantly changing as patients and visitors enter and leave (22). Besides, the composition of microbes in the environment is not determined solely by its occupants. Other factors, such as ventilation and even architecture, can determine what microbes we find in our environment. In fact, hospital rooms with more airflow and humidity were found to have suppressed the growth of potential pathogens and had fewer human-associated bacteria in its microbial composition (23). Just as the microbe composition in the environment can be determined by architectural and building factors, the microbe composition in our microflora can hold incredible influence over our physiology. Dysbiosis, an imbalance in our microflora, can occur as a result of repeated consumption of antibiotics, and it is a serious illness resulting in a significant loss of beneficial and commensal microbes (24). Consequently, invasion and colonisation capabilities of foreign pathogens is increased; as has been shown in antibiotic-treated mice exposed to M. tuberculosis, where pathogenic colonisation was promoted when in a dysbiotic state (25). Other factors, such as diet and lifestyle, also contribute as “disturbance” factors that influence dysbiosis, as can be seen in typical Western-style diets that mostly consist of high fatty and sugary foods (26). In the future, while the crises of pandemics originating from drug-resistant superbugs loom over us, our understanding of microbial life has come far; from its humble beginnings as a rejected theory amongst scholars, to the discovery of an extensive microbial ecosystem inside of our guts. Despite that, our comprehension of this “hidden world” remains lacking, and we have yet to fully realise the potential of microbial life. Throughout history we have constantly taken an antimicrobial stance to preserve public health, but in recent times it has become increasingly clear that these microorganisms play a much greater role in health. References: 1. LePan, Nicholas. “Visualizing the History of Pandemics.” Visual Capitalist. Last modified September 2021. https://www.visualcapitalist.com/history-of-pandemics-deadliest/ . 2. World Health Organization. “Tuberculosis.” Published October 2020. https://www.who.int/news-room/fact-sheets/detail/tuberculosis . 3. Centers for Disease Control and Prevention. “Typhoid Fever and Paratyphoid Fever.” Last modified March 2021. https://www.cdc.gov/typhoid-fever/health-professional.html . 4. Dykhuizen, Daniel. “Species Numbers in Bacteria.” Supplement, Proceedings. California Academy of Science 56, no. S6 (2005): 62-71. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3160642/ . 5. Kannadan, Ajesh. “History of the Miasma Theory of Disease.” ESSAI 16, no. 1 (2018): 41-43. https://dc.cod.edu/essai/vol16/iss1/18/ . 6, 8. Greenwood, Michael. “History of Microbiology – Germ Theory and Immunity.” News-Medical. Last modified May 2020. https://www.news-medical.net/life-sciences/History-of-Microbiology-e28093-Germ-Theory-and-Immunity.aspx . 7. Britannica. “Germ theory.” Last modified April 2020. https://www.britannica.com/science/germ-theory . 9, 10. Gradmann, Christoph. “A spirit of scientific rigour: Koch’s postulates in twentieth-century medicine.” Microbes and Infection 16, no. 11 (2014): 885-892. https://doi.org/10.1016/j.micinf.2014.08.012 . 11. Valdes, Ana M, Jens Walter, Eran Segal, and Tim D Spector. “Role of the gut microbiota in nutrition and health.” BMJ 361, no. k2179 (2018): 36-44. https://doi.org/10.1136/bmj.k2179 . 12, 24. Martín, Rebeca, Sylvie Miquel, Jonathan Ulmer, Noura Kechaou, Philippe Langella, and Luis G Bermúdez-Humarán. “Role of commensal and probiotic bacteria in human health: a focus on inflammatory bowel disease.” Microbial Cell Factories 12, no. 71 (2013): 1-11. https://doi.org/10.1186/1475-2859-12-71 . 13, 15. Leimbach, Andreas, Jörg Hacker, and Ulrich Dobrindt. “E. coli as an All-rounder: The Thin Line Between Commensalism and Pathogenicity.” In Between Pathogenicity and Commensalism, edited by Ulrich Dobrindt, Jörg Hacker and Catharina Svanborg, 3-32. Springer: Berlin, 2013. 14. Libertucci, Josie, and Vincent B Young. “The role of the microbiota in infectious diseases.” Nat Microbial 4, no. 1 (2019): 35-45. https://doi.org/10.1038/s41564-018-0278-4 . 15. Harvard Medical School. “When urinary tract infections keep coming back.” Published September 2019. https://www.health.harvard.edu/bladder-and-bowel/when-urinary-tract-infections-keep-coming-back . 16. Saunders, Charles W, Annika Scheynius, Joseph Heitman. “Malassezia Fungi Are Specialized to Live on Skin and Associated with Dandruff, Eczema and Other Skin Diseases.” PLoS pathogens 8, no. 6 (2012): 1-4. https://doi.org/10.1371/journal.ppat.1002701 . 17. Cogen, A. L., V. Nizet, and R. L. Gallo. “Skin microbiota: a source of disease or defence?” British journal of dermatology 158, no. 3 (2008), https://doi.org/10.1111/j.1365-2133.2008.08437.x . 18, 20. Klein, Eili, David L Smith, and Ramanan Laxminarayan. “Hospitalizations and Deaths Caused by Methicillin-Resistant Staphylococcus aureus, United States, 1999–2005.” Emerging infectious diseases 13, no. 12 (2007): 1840-1846. https://doi.org/10.3201/eid1312.070629 . 19. Dawson, Thomas L. “What causes dandruff, and how do you get rid of it?” February 10, 2021. Ted-Ed video, 5:04. https://youtu.be/x6DUOokXZAo . 21. Better Health. “Antibiotic resistant bacteria.” Last modified March 2017. https://www.betterhealth.vic.gov.au/health/conditionsandtreatments/antibiotic-resistant-bacteria#bhc-content . 22, 23. Arnold, Carrie. “Rethinking Sterile: The Hospital Microbiome.” Environmental health perspective 122, no. 7 (2014): A182-A187. https://doi.org/10.1289/ehp.122-A182 . 25. Khan, Rabia, Fernanda C Petersen, and Sudhanshu Shekhar. “Commensal Bacteria: An Emerging Player in Defense Against Respiratory Pathogens.” Frontiers in Immunology 10, no. 1 (2019): 1203-1211. https://doi.org/10.3389/fimmu.2019.01203 . 26. Schippa, Serena, and Maria P Conte. “Dysbiotic Events in Gut Microbiota: Impact on Human Health.” Nutrients 6, no. 12 (2014): 5786-5805. https://doi.org/10.3390/nu6125786 . 27. Sottek, Frank. Microbes in Food. c. 1904. The Tacoma Times, Tacoma. https://commons.wikimedia.org/wiki/File:Sottek_cartoon_about_microbes_in_food.jpg .
- Silent conversations | OmniSci Magazine
Have you ever wondered if trees talk to each other? Happily, many scientists across time have had the same thought. So much fascinating knowledge has arisen from their research about the intricacies of trees and the different ways they converse with one another. Chatter Silent Conversations: How Trees Talk to One Another By Lily McCann There are so many conversations that go on beyond our hearing. This column explores communication between trees and how it might change the way we perceive them. Edited by Ethan Newnham, Irene Lee & Niesha Baker Issue 1: September 24, 2021 Illustration by Rachel Ko It’s getting brighter. A long, long winter is receding and warm days are flooding in. I’m not one for sunbathing, but I love to lie in the backyard in the shade of the gums and gaze up into the branches. They seem to revel in the weather as much as I do, waving arms languidly in the light or holding still as if afraid to lose a single ray of sun. If there’s a breeze, you might just be able to hear them whispering to one another. There’s a whole family of these gums in my backyard and each one is different. I can picture them as distinctly as the faces of people I love. One wears a thick, red coat of shaggy bark; another has pale, smooth skin; a third sheds its outer layer in long, stringy filaments that droop like scarves from its limbs. These different forms express distinct personalities. Gum trees make you feel there is more to them than just wood and leaves. There’s a red gum in Central Victoria called the ‘Maternity Tree’. It’s incredible to look at. The huge trunk is hollowed out and forms a sort of alcove or belly, open to the sky. Generations of Dja Dja Wurrung women have sought shelter here when in labour. An arson attack recently blackened the trunk and lower branches, but the tree survived (1). Such trees have incredibly long, rich lives. Imagine all the things they would say, if they could only tell us their stories. Whilst the ‘whispering’ of foliage in the wind may not have significance beyond its symbolism, there are other kinds of communication trees can harness. All we see when a breeze blows are branches and leaves swaying before it, but all the time a plethora of tiny molecules are pouring out from trees into the air. These compounds act like tiny, encrypted messages riding the wind, to be decoded by neighbours. They can carry warnings about unwanted visitors, or even coordinate group projects like flowering, so that trees can bloom in synchrony. If we turn our gaze lower we can see that more dialogue spreads below ground. Trees have their own telephone cable system (7), linking up members of the same and even different species. This system takes the form of fungal networks, which transfer nutrients and signals between trees (3). Unfortunately, subscription to this network isn’t free: fungi demand a sugar supply for their services. Overall, though, the relationship is beneficial to both parties and allows for an effective form of underground communication in forests. These conversations are not restricted to deep-rooted, leaf-bearing beings: trees are multilingual. A whole web of inter-species dialogue murmurs amongst the branches beyond the grasp of our deaf ears. Through the language of scent, trees entice pollinators such as bees and birds to feed on their nectar and spread their pollen (4). They warn predators against attacking by releasing certain chemicals (5). They can even manipulate other species for their own defence: when attacked by wax scale insects, a Persimmon tree calls up its own personal army by alerting ladybugs, who feed on the scales, averting the threat to the tree (6). Such relationships demonstrate the crucial role trees play in local ecosystems and their essentially cooperative natures. Trees can be very altruistic, especially when it comes to family members. Mother trees foster the growth of young ones by providing nutrients, and descendants support their elderly relatives - even corpses of hewn-down trees - through their underground cable systems. These intimate, extensive connections between trees are not so different from our own societal networks. Do trees, too, have communities, family loyalties, friends? Can they express the qualities of love and trust required, in the human world, for such relationships? This thought begs the question: Can trees feel? They certainly have an emotional impact on us. I can sense it as I lie under the gums. Think about the last time you went hiking, sat in a tree’s shade, walked through a local park. There’s something about being amongst trees that calms and inspires. Science agrees: one study has shown that walking in forests is more beneficial to our health than walking through the city. How do trees manage to have such a strong effect on us? Peter Wohlleben, German forester and author of The Hidden Life of Trees, suggests that happy trees may impart their mood to us (9). He compares the atmosphere around ‘unhappy’ trees in plantations where threats abound and stress signals fill the air to old forests where ecosystem relations are more stabilised and trees healthier. We feel more relaxed and content in these latter environments. The emotive capacity of trees is yet to be proven scientifically, but is it a reasonable claim? If we define happiness as the circulation of ‘good’ molecules such as growth hormones and sugars, and the absence of ‘bad’ ones like distress signals, then we may suggest that for trees an abundance of good cues and a lack of warnings could be associated with a positive state. And this positive state - allowing trees to fulfill day-to-day functions, grow and proliferate, live in harmony with their environment - could be termed a kind of happiness in its own right. This may seem like a stretch - after all, how can you feel happiness without a brain? But Baluska et al. suggest that trees have those too, or something like them: command centres, integrative hubs in roots functioning somewhat like our own brains (10). Others compare a tree to an axon, a single nerve, conducting electrical signals along its length (11). Perhaps we could say that a forest, the aggregate of all these nerve connections, is a brain. Whilst we can draw endless analogies between the two, trees and animals parted ways 1.5 billion years ago in their evolutionary paths (12). Each developed their own ways of listening and responding to their environments. Who’s to say whether they haven’t both developed their own kinds of consciousness? If we take the time to contemplate trees, we can see that they are infinitely more complex and sensitive than we could have imagined. They have their own modes of communicating with and reacting to their environment. The fact is, trees are storytellers. They send out a constant flow of information into the air, the soil, and the root and fungal systems that join them to their community. Even if we can’t converse with trees in the same way that we converse with each other, it’s worth listening in on their chatter. They could tell us about changes in climate, threats to their environment, and how we can best help these graceful beings and the world around them. References: 1. Schubert, Shannon. “700yo Aboriginal Maternity Tree Set Alight in Victoria.” www.abc.net.au , August 8, 2021. https://www.abc.net.au/news/2021-08-08/dja-dja-wurrung-birthing-tree-set-on-fire/100359690. 2. Pichersky, Eran, and Jonathan Gershenzon. “The Formation and Function of Plant Volatiles: Perfumes for Pollinator Attraction and Defense.” Current Opinion in Plant Biology 5, no. 3 (June 2002): 237–43. https://doi.org/10.1016/s1369-5266(02)00251-0.; Falik, Omer, Ishay Hoffmann, and Ariel Novoplansky. “Say It with Flowers.” Plant Signaling & Behavior 9, no. 4 (March 5, 2014): e28258. https://doi.org/10.4161/psb.28258. 3. Simard, Suzanne W., David A. Perry, Melanie D. Jones, David D. Myrold, Daniel M. Durall, and Randy Molina. “Net Transfer of Carbon between Ectomycorrhizal Tree Species in the Field.” Nature 388, no. 6642 (August 1997): 579–82. https://doi.org/10.1038/41557. 4. Buchmann, Stephen L, and Gary Paul Nabhan. The Forgotten Pollinators. Editorial: Washington, D.C.: Island Press/Shearwater Books, 1997. 5. De Moraes, Consuelo M., Mark C. Mescher, and James H. Tumlinson. “Caterpillar-Induced Nocturnal Plant Volatiles Repel Conspecific Females.” Nature 410, no. 6828 (March 2001): 577–80. https://doi.org/10.1038/35069058. 6. Zhang, Yanfeng, Yingping Xie, Jiaoliang Xue, Guoliang Peng, and Xu Wang. “Effect of Volatile Emissions, Especially -Pinene, from Persimmon Trees Infested by Japanese Wax Scales or Treated with Methyl Jasmonate on Recruitment of Ladybeetle Predators.” Environmental Entomology 38, no. 5 (October 1, 2009): 1439–45. https://doi.org/10.1603/022.038.0512. 7, 9. Wohlleben, Peter, Jane Billinghurst, Tim F Flannery, Suzanne W Simard, and David Suzuki Institute. The Hidden Life of Trees : The Illustrated Edition. Vancouver ; Berkeley: David Suzuki Institute, 2018. 10. Baluška, František, Stefano Mancuso, Dieter Volkmann, and Peter Barlow. “The ‘Root-Brain’ Hypothesis of Charles and Francis Darwin.” Plant Signaling & Behavior 4, no. 12 (December 2009): 1121–27. https://doi.org/10.4161/psb.4.12.10574. 11. Hedrich, Rainer, Vicenta Salvador-Recatalà, and Ingo Dreyer. “Electrical Wiring and Long-Distance Plant Communication.” Trends in Plant Science 21, no. 5 (May 2016): 376–87. https://doi.org/10.1016/j.tplants.2016.01.016. 12. Wang, Daniel Y.-C., Sudhir Kumar, and S. Blair Hedges. “Divergence Time Estimates for the Early History of Animal Phyla and the Origin of Plants, Animals and Fungi.” Proceedings of the Royal Society of London. Series B: Biological Sciences 266, no. 1415 (January 22, 1999): 163–71. https://doi.org/10.1098/rspb.1999.0617.